BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C05SP1|AL429187
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig843 1389 0.0
>3x_Contig843
Length = 3365
Score = 1389 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Minus
Query: 1 agtattaaatatatatacaaatatgtccatccattttgttgatagacgttaatgccaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 agtattaaatatatatacaaatatgtccatccattttgttgatagacgttaatgccaact 650
Query: 61 agtaaatcttgttaatcttgtgatgtttgatacttcatctagtcgataacttaagtagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agtaaatcttgttaatcttgtgatgtttgatacttcatctagtcgataacttaagtagtg 590
Query: 121 gcaaggtattaagaggaatccaggcttaagccacccgctgtttattctctttgccttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gcaaggtattaagaggaatccaggcttaagccacccgctgtttattctctttgccttgtg 530
Query: 181 gtttttttcaggtttttttctggtatttctcttttcgaatcattttgcatatcaaaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtttttttcaggtttttttctggtatttctcttttcgaatcattttgcatatcaaaagtt 470
Query: 241 tctctaaggtttctcaaggttctatctcatcgtcctttgatagtatttagttaacaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tctctaaggtttctcaaggttctatctcatcgtcctttgatagtatttagttaacaagct 410
Query: 301 ttctatttgtttgtctgtgtgtggattttcgttttcagctgaaagttccctactccaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttctatttgtttgtctgtgtgtggattttcgttttcagctgaaagttccctactccaaga 350
Query: 361 catggagtgcttactttggatcccgtggttcatcaaaagggtatatttgggtggtgtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 catggagtgcttactttggatcccgtggttcatcaaaagggtatatttgggtggtgtaaa 290
Query: 421 tcaacgcaatgtcttcacactggctttgaatttttgtttgaatttctcaccaatctttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcaacgcaatgtcttcacactggctttgaatttttgtttgaatttctcaccaatctttat 230
Query: 481 atggttgtttatgttcaagaatgcaggtgtcatacctaccaattggcgaccacccatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atggttgtttatgttcaagaatgcaggtgtcatacctaccaattggcgaccacccatttg 170
Query: 541 gggtagcgtcgcttattattgtgatgcgtatatttttggtgattactggcattctcttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gggtagcgtcgcttattattgtgatgcgtatatttttggtgattactggcattctcttga 110
Query: 601 taccaggttggaattcgtggtgtctctcgtgagcagtagtatcatcggtatcttatttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 taccaggttggaattcgtggtgtctctcgtgagcagtagtatcatcggtatcttatttgc 50
Query: 661 tgtggtgccattgttcatctggtactatgtttattatacc 700
||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tgtggtgccattgttcatctggtactatgtttattatacc 10
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7320
Number of Sequences: 1807
Number of extensions: 7320
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)